Sampling event

Relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water, Adriatic Sea time-series 2019-2020

Latest version published by National Institute of Oceanography and Applied Geophysics on 17 May 2024 National Institute of Oceanography and Applied Geophysics

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 92 records in English (181 KB) - Update frequency: as needed
Metadata as an EML file download in English (7 KB)
Metadata as an RTF file download in English (8 KB)

Description

The dataset reports the relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water samples collected in the proximity of discharge points at sea. The data derive from Next Generation Sequencing of amplicons of the V4-V5 region of 16S rRNA gene. Only genera belonging to traditional and alternative (Newton et al 2013, Microbial Ecology 65, 1011-1023) fecal indicator bacteria are reported.

Data Records

The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 92 records.

2 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

Event (core)
92
ExtendedMeasurementOrFact 
4462
Occurrence 
4459

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Cellussi M (2024): Relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water, Adriatic Sea time-series 2019-2020. v2.4. National Institute of Oceanography and Applied Geophysics. Dataset/Samplingevent. https://doi.org/10.13120/a19k-f376

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is National Institute of Oceanography and Applied Geophysics. This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 04dd6bde-4548-4a92-a366-8efa94098de1.  National Institute of Oceanography and Applied Geophysics publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Ocean Biodiversity Information System.

Keywords

Abundance; Bacteria; Wastewater; Coastal; Adriatic; Sea; Samplingevent

Contacts

Nikola Holodkov
  • Curator
Scientist
National Institute for Oceanography and Applied Geophysics (OGS)
Mauro Cellussi
  • Metadata Provider
  • Originator
  • Point Of Contact
Scientist
National Institute for Oceanography and Applied Geophysics (OGS)

Geographic Coverage

http://marineregions.org/mrgid/3314

Bounding Coordinates South West [42.157, 13.018], North East [45.761, 16.525]

Taxonomic Coverage

No Description available

Kingdom Protozoa

Temporal Coverage

Start Date / End Date 2019-04-20 / 2020-10-01

Sampling Methods

The number of an identified biological object described elsewhere in the metadata occurring in a given volume of any body of salt or fresh water.

Study Extent Relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water measured at six different locations in the Adriatic Sea in the temporal window 2019-2020

Method step description:

  1. The dataset reports the relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water samples collected in the proximity of discharge points at sea. The data derive from Next Generation Sequencing of amplicons of the V4-V5 region of 16S rRNA gene. Only genera belonging to traditional and alternative (Newton et al 2013, Microbial Ecology 65, 1011-1023) fecal indicator bacteria are reported.

Additional Metadata